2011 McArdle Publications

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Al-Dhaheri, M., Wu, J., Skliris, G. P., Li, J., Higashimato, K., Wang, Y., White, K. P., Lambert, P., Zhu, Y., Murphy, L., and Xu, W.  CARM1 Is an Important Determinant of ERα-Dependent Breast Cancer Cell Differentiation and Proliferation in Breast Cancer Cells.  Cancer Res., 71: 2118-2128, 2011.

Berry, S. M., Alarid, E. T., and Beebe, D. J.  One-Step Purification of Nucleic Acid for Gene Expression Analysis via Immiscible Filtration Assisted by Surface Tension (IFAST).  Lab Chip, 11: 1747-1753, 2011.

Berry, S. M., Strotman, L. N., Kueck, J. D., Alarid, E. T., and Beebe, D. J.  Purification of Cell Subpopulations via Immiscible Filtration Assisted by Surface Tension (IFAST).  Biomed. Microdevices, 13: 1033-1042, 2011.

Bhatia, N., Yang, B., Xiao, T. Z., Peters, N., Hoffmann, F. M., and Longley, B. J.  Identification of Novel Small Molecules That Inhibit Protein-Protein Interactions between MAGE and KAP-1.  Arch. Biochem. Biophys., 508:  217-221, 2011.

Boutwell, R. K., Burgess, R. R., Dove, W. F., and Pitot, H. C.  On the Passing of Gerald C. Mueller, MD, PhD (1920-2010).  Cancer Res., 71:  6909-6910, 2011.

Chernoff, N., Rogers, E. H., Zehr, R. D., Gage, M. I., Malarkey, D. E., Bradfield, C. A., Liu, Y., Schmid, J. E., Jaskot, R. H., Richards, J. H., Wood, C. R., and Rosen, M. B.  Toxicity and Recovery in the Pregnant Mouse After Gestational Exposure to the Cyanobacterial Toxin, Cylindrospermopsin.  J. Appl. Toxicol., 31: 242-254, 2011.

Chumanov, R. S., and Burgess, R. R.  Artifact-Inducing Enrichment of Ethylenediaminetetraacetic Acid and Ethyleneglycoltetraacetic Acid on Anion Exchange Resins.  Anal. Biochem., 412:  34-39, 2011.

Chumanov, R. S., Kuhn, P. A., Xu, W., and Burgess, R. R.  Expression and Purification of Full-Length Mouse CARM1 from Transiently Transfected HEK293T Cells Using HaloTag Technology.  Protein Expr. Purif., 76: 145-153, 2011.

Copp, R. R., Peebles, D. D., and Fahl, W. E.  Synthesis and Growth Regulatory Activity of a Prototype Member of a New Family of Aminothiol Radioprotectors.  Bioorg. Med. Chem. Lett., 21:  7426-7430, 2011.

Dresang, L. R., Teuton, J. R., Feng, H., Jacobs, J. M., Camp, D. G. II, Purvine, S. O., Gritsenko, M. A., Li, Z., Smith, R. D., Sugden, B., Moore, P. S., and Chang, Y.  Coupled Transcriptome and Proteome Analysis of Human Lymphotrophic Tumor Viruses:  Insights on the Detection and Discovery of Viral Genes.  BMC Genomics, 12(1):625, 2011.

Drinkwater, N. R., and Denniston, C.  Statistical Problems in Genetics and Molecular Biology.  Charleston:  CreateSpace Independent Publishing, 298 pp., 2011.

Gancarz, B. L., Hao, L., He, Q., Newton, M. A., and Ahlquist, P.  Systematic Identification of Novel, Essential Host Genes Affecting Bromovirus RNA Replication.  PLoS One, 6(8):e23988, 2011.

Hagemeier, S. R., Barlow, E. A., Kleman, A. A., and Kenney, S. C.  The Epstein-Barr Virus BRRF1 Protein, Na, Induces Lytic Infection in a TRAF2- and p53-Dependent Manner.  J. Virol., 85: 4318-4329, 2011.

Hegde, S., Lockridge, J. L., Becker, Y. A., Ma, S., Kenney, S. C., and Gumperz, J. E. Human NKT Cells Direct the Differentiation of Myeloid APCs That Regulate T Cell Responses via Expression of Programmed Cell Death Ligands. J. Autoimmun., 37: 28-38, 2011.

Hwang, J., and Kalejta, R. F.  In vivo Analysis of Protein Sumoylation Induced by a Viral Protein:  Detection of HCMV pp71-Induced Daxx Sumoylation.  Methods, 55:  160-165, 2011.

Hwang, J., Saffert, R. T., and Kalejta, R. F.  Elongin B-Mediated Epigenetic Alteration of Viral Chromatin Correlates with Efficient Human Cytomegalovirus Gene Expression and Replication.  mBio, 2(2):e00023-11, 2011.

Hwang, J., Winkler, L., and Kalejta, R. F.  Ubiquitin-Independent Proteasomal Degradation during Oncogenic Viral Infections.  Biochim. Biophys. Acta, 1816:  147-157, 2011.

Iempridee, T., Das, S., Xu, I., and Mertz, J. E. Transforming Growth Factor β-Induced Reactivation of Epstein-Barr Virus Involves Multiple Smad-Binding Elements Cooperatively Activating Expression of the Latent-Lytic Switch BZLF1 Gene. J. Virol., 85: 7836-7848, 2011.

Irving, A. A., Halberg, R. B., Albrecht, D. M., Plum, L. A., Krentz, K. J., Clipson, L., Drinkwater, N., Amos-Landgraf, J. M., Dove, W. F., and DeLuca, H. F.  Supplementation by Vitamin D Compounds Does Not Affect Colonic Tumor Development in Vitamin D Sufficient Murine Models.  Arch. Biochem. Biophys., 515:  64-71, 2011.

Kakirde, K. S., Wild, J., Godiska, R., Mead, D. A., Wiggins, A. G., Goodman, R. M., Szybalski, W., and Liles, M. R.  Gram Negative Shuttle BAC Vector for Heterologous Expression of Metagenomic Libraries.  Gene, 475: 57-62, 2011.

Kim, S., Goel, S., and Alexander C. M. Differentiation Generates Paracrine Cell Pairs That Maintain Basaloid Mouse Mammary Tumors: Proof of Concept. PLoS One, 6(4):e19310, 2011.

Kuhn, P., Chumanov, R., Wang, Y., Ge, Y., Burgess, R. R., and Xu, W.  Automethylation of CARM1 Allows Coupling of Transcription and mRNA Splicing.  Nucleic Acids Res., 39: 2717-2726, 2011.

Lee, M.-H., and Miyamoto, S.  Expanding NFκB and SUMO Ties.  Cell Cycle, 10:  3983-3984, 2011.

Lee, M. H., Mabb, A. M., Gill, G. B., Yeh, E. T. H., and Miyamoto, S.  NF-κB Induction of the SUMO Protease SENP2:  A Negative Feedback Loop to Attenuate Cell Survival Response to Genotoxic Stress.  Mol. Cell, 43:  180-191, 2011.

Lentz, T. B., and Loeb, D. D.  Roles of the Envelope Proteins in the Amplification of Covalently Closed Circular DNA and Completion of Synthesis of the Plus-Strand DNA in Hepatitis B Virus.  J. Virol., 85:  11916-11927, 2011.

Lewellyn, E. B., and Loeb, D. D.  The Arginine Clusters of the Carboxy-Terminal Domain of the Core Protein of Hepatitis B Virus Make Pleiotropic Contributions to Genome Replication.  J. Virol., 85:  1298-1309, 2011.

Lewellyn, E. B., and Loeb, D. D.  Serine Phosphoacceptor Sites within the Core Protein of Hepatitis B Virus Contribute to Genome Replication Pleiotropically.  PLoS One, 6(2):e17202, 2011.

Ma, S.-D., Hegde, S., Young, K. H., Sullivan, R., Rajesh, D., Zhou, Y., Jankowska-Gan, E., Burlingham, W. J., Sun, X., Gulley, M. L., Tang, W., Gumperz, J. E., and Kenney, S. C.  A New Model of Epstein-Barr Virus Infection Reveals an Important Role for Early Lytic Viral Protein Expression in the Development of Lymphomas.  J. Virol., 85:  165-177, 2011.

Martin, S. E., Wu, Z.-H., Gehlhaus, K., Jones, T. L., Zhang, Y.-W., Guha, R., Miyamoto, S., Pommier, Y., and Caplen, N. J.  RNAi Screening Identifies TAK1 as a Potential Target for the Enhanced Efficacy of Topoisomerase Inhibitors.  Curr. Cancer Drug Targets, 11:  976-986, 2011.

Miyamoto, S.  Nuclear Initiated NF-κB Signaling:  NEMO and ATM Take Center Stage.  Cell Res., 21:  116-130, 2011.

Penkert, R. R., and Kalejta, R. F.  Tegument Protein Control of Latent Herpesvirus Establishment and Animation.  Herpesviridae, 2:3, 2011.

Robinson, A. R., Kwek, S. S., Hagemeier, S. R., Wille, C. K., and Kenney, S. C.  Cellular Transcription Factor Oct-1 Interacts with the Epstein-Barr Virus BRLF1 Protein To Promote Disruption of Viral Latency.  J. Virol., 85: 8940-8953, 2011.

Schiro, M. M., Stauber, S. E., Peterson, T. L., Krueger, C., Darnell, S. J., Satyshur, K. A., Drinkwater, N. R., Newton, M. A., and Hoffmann, F. M.  Mutations in Protein-Binding Hot-Spots on the Hub Protein Smad3 Differentially Affect Its Protein Interactions and Smad3-Regulated Gene Expression.  PLoS One, 6(9):e25021, 2011.

Scholthof, K.-B. G., Adkins, S., Czosnek, H., Palukaitis, P., Jacquot, E., Hohn, T., Hohn, B., Saunders, K., Candresse, T., Ahlquist, P., Hemenway, C., and Foster, G. D.  Top 10 Plant Viruses in Molecular Plant Pathology.  Mol. Plant Pathol., 12:  938-954, 2011.

Shaffer, D. R., Savoldo, B., Yi, Z., Chow, K. K. H., Kakarla, S., Spencer, D. M., Dotti, G., Wu, M.-F., Liu, H., Kenney, S., and Gottschalk, S.  T Cells Redirected Against CD70 for the Immunotherapy of CD70-Positive Malignancies.  Blood, 117: 4304-4314, 2011.

Shanle, E. K., and Xu, W.  Endocrine Disrupting Chemicals Targeting Estrogen Receptor Signaling:  Identification and Mechanisms of Action.  Chem. Res. Toxicol., 24:  6-19, 2011.

Shanle, E. K., Hawse, J. R., and Xu, W.  Generation of Stable Reporter Breast Cancer Cell Lines for the Identification of ER Subtype Selective Ligands.  Biochem. Pharmacol., 82:  1940-1949, 2011.

Sharma, D., Smits, B. M. G., Eichelberg, M. R., Meilahn, A. L., Muelbl, M. J., Haag, J. D., and Gould, M. N.  Quantification of Epithelial Cell Differentiation in Mammary Glands and Carcinomas from DMBA- and MNU-Exposed Rats.  PLoS One, 6(10):e26145, 2011.

Sherer, N. M., Swanson, C. M., Hué, S., Roberts, R. G, Bergeron, J. R. C., and Malim, M. H.  Evolution of a Species-Specific Determinant within Human CRM1 That Regulates the Post-Transcriptional Phases of HIV-1 Replication.  PLoS Pathog., 7(11):e1002395, 2011.

Smits, B. M. G., Sharma, D., Samuelson, D. J., Woditschka, S., Mau, B., Haag, J. D., and Gould, M. N.  The Non-Protein Coding Breast Cancer Susceptibility Locus Mcs5a Acts in a Non-Mammary Cell-Autonomous Fashion Through the Immune System and Modulates T-Cell Homeostasis and Functions.  Breast Cancer Res., 13:R81, 2011.

Stalder, E. S., Nagy, L. H., Batalla, P., Arthur, T. M., Thompson, N. E., and Burgess, R. R.  The Epitope for the Polyol-Responsive Monoclonal Antibody 8RB13 Is in the Flap-Domain of the Beta-Subunit of Bacterial RNA Polymerase and Can Be Used as an Epitope Tag for Immunoaffinity Chromatography.  Protein Expr. Purif., 77: 26-33, 2011.

Stanevich, V., Jiang, L., Satyshur, K. A., Li, Y., Jeffrey, P. D., Li, Z., Menden, P., Semmelhack, M. F., and Xing, Y.  The Structural Basis for Tight Control of PP2A Methylation and Function by LCMT-1.  Mol. Cell, 41:  331-342, 2011.

Thliveris, A. T., Clipson, L., White, A., Waggoner, J., Plesh, L., Skinner, B. L., Zahm, C. D., Sullivan, R., Dove, W. F., Newton, M. A., and Halberg, R. B.  Clonal Structure of Carcinogen-Induced Intestinal Tumors in Mice.  Cancer Prev. Res., 4: 916-923, 2011.

Thomas, M. K., Pitot, H. C., Liem, A., and Lambert, P. F.  Dominant Role of HPV16 E7 in Anal Carcinogenesis.  Virology, 421:  114-118, 2011.

Veillet, A. L., Haag, J. D., Remfert, J. L., Meilahn, A. L., Samuelson, D. J., and Gould, M. N.  Mcs5c:  A Mammary Carcinoma Susceptibility Locus Located in a Gene Desert that Associates with Tenascin C Expression.  Cancer Prev. Res., 4:  97-106, 2011.

Vereide, D. T., and Sugden, B.  Lymphomas Differ in Their Dependence on Epstein-Barr Virus.  Blood, 117: 1977-1985, 2011.

Wang, J., Liu, Y., Li, Z., Wang, Z., Tan, L. X., Ryu, M.-J., Meline, B., Du, J., Young, K. H., Ranheim, E., Chang, Q., and Zhang, J. Endogenous Oncogenic Nras Mutation Initiates Hematopoietic Malignancies in a Dose- and Cell Type-Dependent Manner.  Blood, 118: 368-379, 2011.

Wang, J., Liu, Y., Tan, L. X., Lo, J. C., Du, J., Ryu, M.-J., Ranheim, E. A., and Zhang, J.  Distinct Requirements of Hematopoietic Stem Cell Activity and Nras G12D Signaling in Different Cell Types during Leukemogenesis.  Cell Cycle, 10: 2836-2839, 2011.

Wang, X., Diaz, A., Hao, L., Gancarz, B., den Boon, J. A., and Ahlquist, P.  Intersection of the Multivesicular Body Pathway and Lipid Homeostasis in RNA Replication by a Positive-Strand RNA Virus.  J. Virol., 85: 5494-5503, 2011.

Welsh, A. W., Moeder, C. B., Kumar, S., Gershkovich, P., Alarid, E. T., Harigopal, M., Haffty, B. G., and Rimm, D. L.  Standardization of Estrogen Receptor Measurement in Breast Cancer Suggests False-Negative Results Are a Function of Threshold Intensity Rather Than Percentage of Positive Cells.  J. Clin. Oncol., 29: 2978-2984, 2011.

Wu, L., Shao, L., An, N., Wang, J., Pazhanisamy, S., Feng, W., Hauer-Jensen, M., Miyamoto, S., and Zhou, D.  IKKβ Regulates the Repair of DNA Double-Strand Breaks Induced by Ionizing Radiation in MCF-7 Breast Cancer Cells.  PLoS One, 6(4):e18447, 2011.

Wuerzberger-Davis, S. M., Chen, Y., Yang, D. T., Kearns, J. D., Bates, P. W., Lynch, C., Ladell, N. C., Yu, M., Podd, A., Zeng, H., Huang, T. T., Wen, R., Hoffmann, A., Wang, D., and Miyamoto, S.  Nuclear Export of the NF-κB Inhibitor IκBα Is Required for Proper B Cell and Secondary Lymphoid Tissue Formation.  Immunity, 34:  188-200, 2011.

Xia, C., Hamdane, D., Shen, A. L., Choi, V., Kasper, C. B., Pearl, N. M., Zhang, H., Im, S.-C., Waskell, L., and Kim, J.-J. P.  Conformational Changes of NADPH-Cytochrome P450 Oxidoreductase Are Essential for Catalysis and Cofactor Binding.  J. Biol. Chem., 286:  16246-16260, 2011.

Yang, Y., Xia, F., Hermance, N., Mabb, A., Simonson, S., Morrissey, S., Gandhi, P., Munson, M., Miyamoto, S., and Kelliher, M. A.  A Cytosolic ATM/NEMO/RIP1 Complex Recruits TAK1 To Mediate the NF-κB and p38 Mitogen-Activated Protein Kinase (MAPK)/MAPK-Activated Protein 2 Responses to DNA Damage.  Mol. Cell. Biol., 31:  2774-2786, 2011.

Yu, X., McCarthy, P. J., Lim, H.-J., Iempridee, T., Kraus, R. J., Gorlen, D. A., and Mertz, J. E.  The ZIIR Element of the Epstein-Barr Virus BZLF1 Promoter Plays a Central Role in Establishment and Maintenance of Viral Latency.  J. Virol., 85: 5081-5090, 2011.

Zehbe, I., Lichtig, H., Westerback, A., Lambert, P. F., Tommasino, M., and Sherman, L.  Rare Human Papillomavirus 16 E6 Variants Reveal Significant Oncogenic Potential.  Mol. Cancer, 10:77, 2011.